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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841209.1_cds_XP_016507903.1_20980
CDS Infomation

[gene=LOC107825545] [db_xref=GeneID:107825545] [protein=laccase-2-like] [protein_id=XP_016507903.1] [location=join(48134..48253,48360..48511,49000..49244,49328..49456,49555..50529,51052..51182)] [gbkey=CDS]
Sequence

ATGAGCGCTTCTATTTTTTCACCACGATCAATTTTACTTACTATTTTCTGCTTCACGTGT
AGCATTTTTCTATTTCCAGAGTTTGTCACTGCTGGTGTTACAAGGCATTACAAGTTTGAT
ATAAGATTGAAAAATGTGACTAGGCTATGCCAAACAAAGACAATTGTGACTGTGAATGGG
AAATTCCCAGGGCCTCGTGTTGTTGCTAGGGAAGGTGATCGTGTCGTGGTTAAAGTTATT
AATCACGTCTCCAACAATGTTAGCTTCCATTGGCATGGAATTCGACAAATCCAAAGTGGC
TGGGCAGACGGACCAGCATATATCACCCAATGCCCGATACAAACTGGCCAAAGTTATGTC
TACAACTTCACTATTACTGGCCAAAGAGGAACTCTATGGTGGCATGCTCATATTTCATGG
ATGAGAGCTACACTCTATGGACCTCTTATCATTTATCCCAAGCATAATACTTCTTATCCA
TTTGCCAAACCCCACAAAGAAGTTCCCATCATTTTTGGTGAGTGGTGGAATGCTAATACC
GAGGCCGTGATTAATCAATCACTTGTAACTGGAGCTGGACCTAATGTCTCTGATTCATAC
ACTATTAATGGTCTTCCTGGACCATTATACGATTGTTCTGCAAAGGATACATTTAAGCTA
AAGGTAAAGCCTGGGAAGACATATATGCTTCGTATAATCAATGCTGCACTCAATGACGAC
CTTTTCTTCAGTATAGCAAATCATTCAATGACAGTCGTGGAAGCCGATGCAGTTTATGTC
AAACCTTTTGAAACAGATATCATTCTCATTGCACCTGGACAAACTACAAATGTCCTTCTT
AAAACACATCCTAATCCCCAACAAACGACTTTTTTGATGGCAGCCAGACCATATTTCACT
GGCCAAGGCACATTTGATAATTCCACAATTACTGGAATTCTTATGTATGATAATTTATCT
GCAAGTATTAGTTCATCATCTAACACTTCAATTAAAAATCTTCCAATCCCAACTCTTCCA
CCAATTAATTCCACTTCATTTGTAGCCAATTTTAGTAATAAGTTTCGATCTTTGGCTAAT
ACTCAATTCCCTGCTAACGTGCCACAGAAAGTTGACAAACAATTTTTCTTTACAGTAGGC
CTTGGAAGTAACCCGTGCCCAAAAAACCAAACTTGTCAAGGTCCAAATAATTCCTCAAAA
TTTTCTGCTTCTGTTAATAACGTTTCTATGATTCTGCCAACCACAGCACTACTTCAATCC
TACTTCTTCAAAAAATCCAATGGCGTATACACTAGTAATTTTCCAAGTGTCCCTCTTGTG
CCCTTCAATTACACTGGAACTCCTCCAAATAATACTCATGTTTCTAATGGCACAAAAGTT
GTGGTGCTTCCGTTCAATACTTCAGTGGAATTGGTAATGCAGGACACTAGCATTTTAGGA
GCTGAAAGTCATCCTCTTCATCTTCATGGCTATAATTTCTATGTGGTTGGTCAAGGTTTT
GGTAATTTTGATCCTAAAAAAGACCCTGCTAATTATAATCTTGTTGATCCGGTTGAAAGA
AACACCATTGGCGTTCCATCTGGTGGATGGGTAGCCATTCATTTTCTTGCTGACAATCCA
GGAGTATGGTTTATGCACTGTCACTTTGAGGTGCATCTGAGTTGGGGTTTGAGGATGGCT
TGGCTGGTGTTAGATGGAGAGCTTCCAAACCAAAAGTTGCCACCGCCGCCGGCTGATCTT
CCCAAGTGTTAG

Peptide Sequence

PEP ID

XP_016507903.1
PEP Infomation

PREDICTED: laccase-2-like [Nicotiana tabacum]
Sequence

MSASIFSPRSILLTIFCFTCSIFLFPEFVTAGVTRHYKFDIRLKNVTRLCQTKTIVTVNG
KFPGPRVVAREGDRVVVKVINHVSNNVSFHWHGIRQIQSGWADGPAYITQCPIQTGQSYV
YNFTITGQRGTLWWHAHISWMRATLYGPLIIYPKHNTSYPFAKPHKEVPIIFGEWWNANT
EAVINQSLVTGAGPNVSDSYTINGLPGPLYDCSAKDTFKLKVKPGKTYMLRIINAALNDD
LFFSIANHSMTVVEADAVYVKPFETDIILIAPGQTTNVLLKTHPNPQQTTFLMAARPYFT
GQGTFDNSTITGILMYDNLSASISSSSNTSIKNLPIPTLPPINSTSFVANFSNKFRSLAN
TQFPANVPQKVDKQFFFTVGLGSNPCPKNQTCQGPNNSSKFSASVNNVSMILPTTALLQS
YFFKKSNGVYTSNFPSVPLVPFNYTGTPPNNTHVSNGTKVVVLPFNTSVELVMQDTSILG
AESHPLHLHGYNFYVVGQGFGNFDPKKDPANYNLVDPVERNTIGVPSGGWVAIHFLADNP
GVWFMHCHFEVHLSWGLRMAWLVLDGELPNQKLPPPPADLPKC

Transcript Sequence

Gene sequence data has not been registered.